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Scaling up reproducible research for single-cell transcriptomics using MetaNeighbor

Stephan Fischer, Megan Crow, Benjamin D. Harris, Jesse Gillis

Published: 2021-07-06 DOI: 10.1038/s41596-021-00575-5

R package

single-cell transcriptomics

MetaNeighbor

cell-type replicability

gene filtering

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Scanorama: integrating large and diverse single-cell transcriptomic datasets

Single-cell RNA sequencing (scRNA-seq)（单细胞RNA测序）

Data integration（数据集成）

Heterogeneity（异质性）

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References

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Protocol data (R version). http://doi.org/10.6084/m9.figshare.13020569.v2 (2020).
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关键词

R package

single-cell transcriptomics

MetaNeighbor

cell-type replicability

gene filtering

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